extract_screenlog_filename_from_beast2_input_file

Extract the screenlog filename from a BEAST2 input file

'BEAST2' (<https://www.beast2.org>) is a widely used
Bayesian phylogenetic tool, that uses DNA/RNA/protein data
and many model priors to create a posterior of jointly estimated
phylogenies and parameters.
'BEAST2' is a command-line tool.
This package provides a way to call 'BEAST2'
from an 'R' function call.

Richel Bilderbeek

beastier

Call 'BEAST2'

Richèl J.C. Bilderbeek

Joëlle Barido-Sottani

David Winter

Jason Griffiths 

Thijs Janzen

extract_screenlog_filename_from_beast2_input_file function

<dl><dt>input_filename</dt>
<dd>the name of a BEAST2 input XML file.
This file usually has an <code>.xml</code> extension.
Use create_temp_input_filename to create a temporary
filename with that extension.</dd></dl>

Arguments

Author

Internal function to extract the screenlog filename for a BEAST2 input file — extract_screenlog_filename_from_beast2_input_file

<dl>

<dt>input_filename</dt>
<dd>the name of a BEAST2 input XML file.
This file usually has an <code>.xml</code> extension.
Use create_temp_input_filename to create a temporary
filename with that extension.</dd>

</dl>

extract_screenlog_filename_from_beast2_input_file: Internal function to extract the screenlog filename for a BEAST2 input file

Description

Usage

Value

Arguments

Author