check_is_monophyletic

Will <a href="/link/stop?package=beautier&version=2.6.12" data-mini-rdoc="beautier::stop">stop</a> if not.

'BEAST2' (<https://www.beast2.org>) is a widely used
Bayesian phylogenetic tool, that uses DNA/RNA/protein data
and many model priors to create a posterior of jointly estimated
phylogenies and parameters.
'BEAUti 2' (which is part of 'BEAST2') is a GUI tool
that allows users to specify the many possible setups
and generates the XML file 'BEAST2' needs to run.
This package provides a way to create 'BEAST2' input
files without active user input, but using
R function calls instead.

Richèl J.C. Bilderbeek

beautier

'BEAUti' from R

Joëlle Barido-Sottani

David Winter

Paul Van Els

Raphael Scherrer

Yacine B. Chehida

Katharine S. Walter

Gary Napier

Jason Griffiths

Thijs Janzen

Pedro Taucce

Olivier Roy

Jana Riederer

check_is_monophyletic function

<dl><dt>is_monophyletic</dt>
<dd>boolean to indicate monophyly is assumed in
a Most Recent Common Ancestor prior,
as returned by <code>create_mrca_prior</code></dd></dl>

Arguments

Will <a href='https://rdrr.io/r/base/stop.html'>stop</a> if not.

Check if is_monophyletic has a valid value. — check_is_monophyletic

<dl>

<dt>is_monophyletic</dt>
<dd>boolean to indicate monophyly is assumed in
a Most Recent Common Ancestor prior,
as returned by <code>create_mrca_prior</code></dd>

</dl>

Check if <code>is_monophyletic</code> has a valid value.

check_is_monophyletic: Check if `is_monophyletic` has a valid value.

Description

Usage

Value

Arguments