check_phylogeny

Calls <code>stop</code> if the phylogeny is invalid

'BEAST2' (<https://www.beast2.org>) is a widely used
Bayesian phylogenetic tool, that uses DNA/RNA/protein data
and many model priors to create a posterior of jointly estimated
phylogenies and parameters.
'BEAUti 2' (which is part of 'BEAST2') is a GUI tool
that allows users to specify the many possible setups
and generates the XML file 'BEAST2' needs to run.
This package provides a way to create 'BEAST2' input
files without active user input, but using
R function calls instead.

Richèl J.C. Bilderbeek

beautier

'BEAUti' from R

Joëlle Barido-Sottani

David Winter

Paul Van Els

Raphael Scherrer

Yacine B. Chehida

Katharine S. Walter

Gary Napier

Jason Griffiths

Thijs Janzen

Pedro Taucce

Olivier Roy

Jana Riederer

check_phylogeny function

<dl><dt>phylogeny</dt>
<dd>a phylogeny of type <code>phylo</code> from the <code>ape</code>
package</dd></dl>

Arguments

Author

Check if the phylogeny is a valid phylogeny object. — check_phylogeny

<dl>

<dt>phylogeny</dt>
<dd>a phylogeny of type <code>phylo</code> from the <code>ape</code>
package</dd>

</dl>

Check if the phylogeny is a valid phylogeny object.

check_phylogeny: Check if the phylogeny is a valid phylogeny object.

Description

Usage

Value

Arguments

Author

See Also

Examples