create_site_models

<p>Creates all supported site models
  which is a list of the types returned by
  <code>create_gtr_site_model</code>,
  <code>create_hky_site_model</code>,
  <code>create_jc69_site_model</code>
  and <code>create_tn93_site_model</code></p>

'BEAST2' (<https://www.beast2.org>) is a widely used
Bayesian phylogenetic tool, that uses DNA/RNA/protein data
and many model priors to create a posterior of jointly estimated
phylogenies and parameters.
'BEAUti 2' (which is part of 'BEAST2') is a GUI tool
that allows users to specify the many possible setups
and generates the XML file 'BEAST2' needs to run.
This package provides a way to create 'BEAST2' input
files without active user input, but using
R function calls instead.

Richèl J.C. Bilderbeek

beautier

'BEAUti' from R

Joëlle Barido-Sottani

David Winter

Paul Van Els

Raphael Scherrer

Yacine B. Chehida

Katharine S. Walter

Gary Napier

Jason Griffiths

Thijs Janzen

Pedro Taucce

Olivier Roy

Jana Riederer

create_site_models function

Author

Creates all supported site models
  which is a list of the types returned by
  create_gtr_site_model,
  create_hky_site_model,
  create_jc69_site_model
  and create_tn93_site_model — create_site_models

Creates all supported site models
  which is a list of the types returned by
  <code>create_gtr_site_model</code>,
  <code>create_hky_site_model</code>,
  <code>create_jc69_site_model</code>
  and <code>create_tn93_site_model</code>

create_site_models: Creates all supported site models which is a list of the types returned by `create_gtr_site_model`, `create_hky_site_model`, `create_jc69_site_model` and `create_tn93_site_model`

Description

Usage

Arguments

Value

Author

See Also

Examples