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This is done in the same way as BEAST2 does by default The file extension will be used to determine which type of file is worked on.
get_alignment_ids(filenames)
the IDs extracted from the one or more files
names of the files to be checked
Richèl J.C. Bilderbeek
Use get_alignment_ids_from_fasta_filenames to get the alignment IDs from files known to be FASTA files
check_empty_beautier_folder() get_alignment_ids( get_beautier_paths(c("anthus_aco.fas", "anthus_nd2.fas")) ) check_empty_beautier_folder()
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