create.tmp.bed.file

name

where should the temp files be put

tmpDir

Genomic regions processing using open-source command line tools such as 'BEDTools', 'BEDOPS' and 'Tabix'.
These tools offer scalable and efficient utilities to perform genome arithmetic e.g indexing, formatting and merging.
bedr API enhances access to these tools as well as offers additional utilities for genomic regions processing.

Paul C. Boutros

bedr

Genomic Region Processing using Tools Such as 'BEDTools',
'BEDOPS' and 'Tabix'

Syed Haider

Daryl Waggott

Emilie Lalonde

Clement Fung

create.tmp.bed.file function

<dl> <dt>x</dt>
<dd>region object</dd> <dt>name</dt>
<dd>a prefix for the tmp file.</dd> <dt>tmpDir</dt>
<dd>where should the temp files be put</dd></dl>

Arguments

Author

output R objects as tmpfiles — create.tmp.bed.file

<dl>

 <dt>x</dt>
<dd>region object</dd>

 <dt>name</dt>
<dd>a prefix for the tmp file.</dd>

 <dt>tmpDir</dt>
<dd>where should the temp files be put</dd>

</dl>

create.tmp.bed.file: output R objects as tmpfiles

Description

Usage

Arguments

Author

Examples