bedr (version 1.1.3)

get.bedpe.id: get BEDPE ID from VCF ID

Description

Get IDs for each breakpoint pair from the VCF file. Used in the `vcf2bedpe` function.

Usage

get.bedpe.id(df)

Value

A column vector of names assigned to each Structural Variant in the BEDPE file

Arguments

df

a dataframe object from a VCF file

Author

Helena Winata

Examples

if (FALSE) {
  name <- get.bedpe.id(x.vcf)
  }