beeswarm (version 0.0.7)

breast: Lymph-node-negative primary breast tumors

Description

Tumor molecular measurements and outcome from breast cancer patients.

Usage

data(breast)

source

Wang Y, Klijn JG, Zhang Y, Sieuwerts AM, Look MP, Yang F, Talantov D, Timmermans M, Meijer-van Gelder ME, Yu J, Jatkoe T, Berns EM, Atkins D, Foekens JA. Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer. Lancet. 2005 Feb 19-25;365(9460):671-9.

Details

ER, ESR1, and ERBB2 were measured on a tumor specimen surgery (time = 0).

ESR1 and ERBB2 expression values were determined by probe sets 205225_at and 216836_s_at using RMA-normalized data.

Examples

data(breast)

  with(breast, 
    plot(ESR1, ERBB2, col = as.numeric(ER))
  )