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bhrcr (version 1.0.3)

Bayesian Hierarchical Regression on Clearance Rates in the Presence of Lag and Tail Phases

Description

An implementation of the Bayesian Clearance Estimator (Fogarty et al. (2015) ). It takes serial measurements of a response on an individual (e.g., parasite load after treatment) that is decaying over time and performs Bayesian hierarchical regression of the clearance rates on the given covariates. This package provides tools to calculate WWARN PCE (WorldWide Antimalarial Resistance Network's Parasite Clearance Estimator) estimates of the clearance rates as well. A tutorial appeared in Sharifi-Malvajerdi et al. (2019) .

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Version

Install

install.packages('bhrcr')

Monthly Downloads

1

Version

1.0.3

License

GPL-3

Maintainer

Colin Fogarty

Last Published

January 28th, 2019

Functions in bhrcr (1.0.3)

summary.bhrcr

Summary Statistics for the Bayesian Clearance Estimator
pursat

Description of the Dataset pursat.rda
plot.bhrcr

Bayesian Clearance Estimator Plotting
posterior

Description of the Dataset posterior.rda
pursat_covariates

Description of the Dataset pursat_covariates.rda
bhrcr-package

Bayesian Hierarchical Regression on Clearance Rates
calculatePCE

WWARN Parasite Clearance Estimator (PCE)
diagnostics

Diagnostics Function for MCMC
clearanceEstimatorBayes

Bayesian Hierarchical Regression on Clearance Rates
print.bhrcr

Print Function for the Bayesian Clearance Estimator