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bigDM (version 0.5.6)

Mmodel_iid: Spatially non-structured multivariate latent effect

Description

M-model implementation of the spatially non-structured multivariate latent effect using the rgeneric model of INLA.

Usage

Mmodel_iid(
  cmd = c("graph", "Q", "mu", "initial", "log.norm.const", "log.prior", "quit"),
  theta = NULL
)

Value

This is used internally by the INLA::inla.rgeneric.define() function.

Arguments

cmd

Internal functions used by the rgeneric model to define the latent effect.

theta

Vector of hyperparameters.

Details

This function considers a spatially non-structured prior for the spatial latent effects of the different diseases and introduces correlation between them using the M-model proposal of botella2015unifying;textualbigDM. Putting the latent effects for each disease in a matrix, the between disease dependence is introduced through the M matrix as \(\Theta=\Phi M\), where the columns of \(\Phi\) follow an IID (independent and identically distributed) prior distribution (within-disease correlation). A Wishart prior for the between covariance matrix \(M'M\) is considered using the Bartlett decomposition.

The following arguments are required to be defined before calling the functions:

  • W: binary adjacency matrix of the spatial areal units

  • J: number of diseases

  • initial.values: initial values defined for the cells of the M-matrix

References

botella2015unifyingbigDM