bigMap (version 2.3.1)

bdm.wtt.plot: Plot WTT (clustering)

Description

Plot WTT (clustering)

Usage

bdm.wtt.plot(bdm, pakde.pltt = NULL, pakde.lvls = 16, wtt.lwd = 1,
  plot.peaks = T, labels.cex = 1, layer = 1)

Arguments

bdm

A bdm instance as generated by bdm.init() or a list of them to make a comparative plot.

pakde.pltt

A colour palette to show levels in the paKDE plot. By default (pakde.pltt = NULL) the default palette is used.

pakde.lvls

The number of levels of the density heat-map (16 by default).

wtt.lwd

The width of the watertrack lines (as set in par()).

plot.peaks

Logical value (TRUE by default). If set to TRUE and the up-stream step bdm$wtt() is computed marks the peak of each cluster.

labels.cex

If plot.peaks is TRUE, the size of the labels of the clusters (as set in par()). By default labels.cex = 0.0 and the labels of the clusters are not depicted.

layer

The bdm$ptsne layer to be used (default value is layer = 1).

Value

None.

Examples

# NOT RUN {
bdm.example()
exMap <- bdm.wtt.plot(exMap)
# }