cor.dist

cor.dist,matrix-method

cor.dist,eSet-method

n by p matrix or ExpressionSet; if x is an ExpressionSet, then the 
  function uses its 'exprs' slot.

arguments passed to <code>cor.dist</code>:
    <ul>
<li>absif TRUE, then 1-|COR| else 1-COR, default is TRUE.
      </li>
<li>diagif TRUE, then the diagonal of the distance matrix will be
      displayed, default is FALSE. 
      </li>
<li>upperif TRUE, then the upper triangle of the distance matrix
      will be displayed, default is FALSE. 
      </li>
<li>samplefor objects of classes that extend eSet: if TRUE, then
	  distances are computed between samples(columns) , otherwise, they are
      computed between features(rows).
    </li>
</ul><p></p><p>  </p>


 Calculate pairwise Pearson correlational distances, i.e. 1-COR or 1-|COR|,
 and saves as a 'dist' object


A collection of software tools for calculating distance
measures.

Bioconductor Package Maintainer

bioDist

Different distance measures

cor.dist function

arguments passed to <code>cor.dist</code>:
    <ul><li>abs</li></ul>{if TRUE, then 1-|COR| else 1-COR, default is TRUE.}
      <item>diag</item>{if TRUE, then the diagonal of the distance matrix will be
      displayed, default is FALSE.} 
      <item>upper</item>{if TRUE, then the upper triangle of the distance matrix
      will be displayed, default is FALSE.} 
      <item>sample</item>{for objects of classes that extend eSet: if TRUE, then
	  distances are computed between samples(columns) , otherwise, they are
      computed between features(rows).}

Calculate pairwise Pearson correlational distances, i.e. 1-COR or 1-|COR|,
 and saves as a 'dist' object

cor.dist: Pearson correlational distance

Description

Usage

Arguments

Value

Details

See Also

Examples