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biocViews (version 1.40.1)
Categorized views of R package repositories
Description
structures for vocabularies and narratives of views
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Version
Version
1.40.1
1.40.0
1.38.0
1.36.2
1.34.1
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Version
1.40.1
License
Artistic-2.0
Maintainer
Bioconductor Package Maintainer
Last Published
January 1st, 1970
Functions in biocViews (1.40.1)
Search functions
extractVignettes
Extract pdf vignettes from local package repository
writePackageDetailHtml
Write HTML files for packages in a CRAN-style repository
writeRepositoryHtml
Write package descriptions and a repository index as HTML
writeRFilesFromVignettes
Write R files from vignettes
genReposControlFiles
Generate CRAN-style repository control files
writeTopLevelView
Write the view for the root of a vocabulary to disk
recommendBiocViews
Recommend biocViews for an existing Package.
PackageDetail-class
Class "PackageDetail"
extractTopLevelFiles
Extract files from the top level of source package tarballs
extractNEWS
Extract NEWS files from source package tarballs
writeBiocViews
Write a list of BiocView objects to HTML
writeHtmlDoc
Write an XML DOM containing HTML to a file
getBiocSubViews
Build a list of BiocView objects from a package repository
Htmlized-class
Class "Htmlized"
getBiocViews
Build a list of BiocView objects from a package repository
htmlValue
HTML Representation of an Object
biocViews-package
Categorized views of R package repositories
BiocView-class
Class "BiocView"
getCurrentbiocViews
Get a list of biocViews for each branch
getPackageNEWS
Retrieve and print package NEWS
write_VIEWS
Write a VIEWS control file for a CRAN-style package repository
write_SYMBOLS
Write a SYMBOLS file
htmlFilename
Return a filename for an object's HTML representation
htmlDoc
Create a complete HTML document representation of an object
recommendPackages
Recommend Packages using existing biocViews.
RepositoryDetail-class
Class "RepositoryDetail"
biocViewsVocab
Bioconductor Task Views Vocabulary Data
extractManuals
Extract Rd man pages and build pdf reference manuals from local package repository
getPacksAndViews
Parse VIEWS file for views and packages
validate_bioc_views
Validate a package's biocViews.
getSubTerms
Retrieve a term and its children from a vocab DAG
write_REPOSITORY
Write a REPOSITORY control file for a CRAN-style package repository