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biofiles (version 1.0.0)

gbLocus-class: Generator object for the "gbLocus" reference class

Description

Generator object for the "gbLocus" reference class

Generates an object representing a GenBank LOCUS line.

Arguments

...

List of arguments (see NOTE)

Methods

#new(lnm, len, mtp, div, top, mdt, cdt):

Create a new '>gbLocus object

#to_string():

Create a string representation of a GenBank LOCUS field.

Fields

lnm:

Locus name. Usually the accession number.

len:

Sequence length; In bp or aa, depending on mtp.

mtp:

Molecule type; NA, DNA, RNA, tRNA (transfer RNA), rRNA (ribosomal RNA), mRNA (messenger RNA), uRNA (small nuclear RNA), or AA (protein sequence). RNAs can be prefixes ss- (single-stranded), ds- (double-stranded), or ms- (mixed-stranded)

div:

Genbank division.

top:

Topology; linear, circular, or missing (NA).

mdt:

Modification date.

cdt:

Create date.

Extends

All reference classes extend and inherit methods from "'>envRefClass".

Examples

Run this code
# NOT RUN {
showClass("gbLocus")
# }

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