Learn R Programming

biogram (version 1.3)

aaprop: Normalized amino acids properties

Description

Normalized (0-1) 554 amino acid properties as retreived from AAIndex database (release 9.1) enriched with contactivity of amino acids.

Arguments

Format

A data frames with 20 columns and 600 rows.

Source

AAIndex database.

Details

Following properties are included (AAIndex key: description of the property)

References

Kawashima, S. and Kanehisa, M. (2000) AAindex: amino acid index database. Nucleic Acids Res., 28:374.

Wozniak, P. and Kotulska M. (2014) Characteristics of protein residue-residue contacts and their application in contact prediction. 20(11):2497

Examples

Run this code
data(aaprop)

Run the code above in your browser using DataLab