Learn R Programming

biogram (version 1.3)

human_cleave: Human signal peptides cleavage sites

Description

A set of 648 cleavage sites and 648 parts of mature proteins shortly after cleavage sites derived from human proteome.

Arguments

Format

A data frame with 1296 observations on the following 10 variables. Columns from P1 to P9 describes positions in an extracted peptide. tar is a target vector. It has value 1 if a peptide is a cleavage site and 0 if not.

Source

UniProt

Details

Each peptide in the data set is nine amino acid residues long. In case of cleavage sites, the clevage is located between fifth and sixth peptide. The non-cleavage sites are parts of mature proteins starting five positions after cleavage site.

Examples

Run this code

data(human_cleave)
table(human_cleave[, 1])

Run the code above in your browser using DataLab