Converts an encoding to a data frame.
encoding2df(x, sort = FALSE)encoding.
if TRUE rows are sorted according to elements.
data frame with two columns. First column represents an index of a group in the supplied encoding and the second column contains all elements of the encoding.
The encoding is a list of groups to which elements of an alphabet should be reduced. All elements of the alphabet (all amino acids or all nucleotides) should appear in the encoding.
calc_ed: calculate the encoding distance between two encodings.
encoding2df: converts an encoding to a data frame.
validate_encoding: validate a structure of an encoding.
# NOT RUN {
create_encoding(aaprop[1L:5, ], 5)
# }
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