check_stochastic_pars

Does several checks of the model parameters. Besides those by
check_primary_pars, it checks that corr_matrix is square, that pars and
corr_matrix have compatible dimensions, and that pars has the correct names.

Modelling of population growth under static and dynamic environmental conditions.
Includes functions for model fitting and making prediction under isothermal and
dynamic conditions. The methods (algorithms & models) are based on
predictive microbiology (See Perez-Rodriguez and Valero (2012, ISBN:978-1-4614-5519-6)).

Alberto Garre

biogrowth

Modelling of Population Growth

Jeroen Koomen

Heidy den Besten

Marcel Zwietering

check_stochastic_pars function

<dl><dt>model_name</dt>
<dd>Character describing the primary growth model.</dd>
<dt>pars</dt>
<dd>A tibble describing the parameter uncertainty (see details).</dd>
<dt>corr_matrix</dt>
<dd>Correlation matrix of the model parameters. Defined in the
same order as in <code>pars</code>. An identity matrix by default
(uncorrelated parameters).</dd></dl>

Arguments

Model definition checks for predict_stochastic_growth — check_stochastic_pars

<dl>

<dt>model_name</dt>
<dd>Character describing the primary growth model.</dd>


<dt>pars</dt>
<dd>A tibble describing the parameter uncertainty (see details).</dd>


<dt>corr_matrix</dt>
<dd>Correlation matrix of the model parameters. Defined in the
same order as in <code>pars</code>. An identity matrix by default
(uncorrelated parameters).</dd>

</dl>

check_stochastic_pars: Model definition checks for predict_stochastic_growth

Description

Usage

Arguments