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biolink (version 0.1.7)

urls: Construct urls to online resources

Description

These resource-specific functions return a bare url (i.e., not a hyperlink) to the relevant online database/resource based on the provided identifier.

Usage

url_go(id)
url_kegg(id)
url_pubmed(id)
url_entrez(id)
url_cran(id)
url_bioc(id)

Arguments

id

valid identifier for the relevant online database

Functions

  • url_go: for Gene Ontology Consortium

  • url_kegg: for KEGG Pathway Database

  • url_pubmed: for PubMed based on PMID (PubMed identifier)

  • url_entrez: for NCBI's database for gene-specific information based on Entrez ID

  • url_cran: for R packages available from CRAN

  • url_bioc: for R packages available from Bioconductor

Examples

Run this code
# gene ontology url
url_go("GO:0005539")

# KEGG pathway url
url_kegg("hsa04915")

# PubMed article url
url_pubmed("23193287")

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