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biom (version 0.3.9)

An interface package (beta) for the BIOM file format.

Description

This is an R package for interfacing with the BIOM format. Currently in beta form, this package includes basic tools for reading biom-format files, accessing and subsetting data tables from a biom object (which is more complex than a single table), as well as limited support for writing a biom-object back to a biom-format file. The design of this API is intended to match the python API and other tools included with the biom-format project, but with a decidedly "R flavor" that should be familiar to R users. This includes S4 classes and methods, as well as extensions of common core functions/methods.

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Install

install.packages('biom')

Monthly Downloads

57

Version

0.3.9

License

GPL-2 | file LICENSE

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Last Published

May 22nd, 2013

Functions in biom (0.3.9)