biomaRt (version 2.28.0)

exportFASTA: Exports getSequence results to FASTA format

Description

Exports getSequence results to FASTA format

Usage

exportFASTA(sequences, file)

Arguments

sequences

A data.frame that was the output of the getSequence function

file

File to which you want to write the data

Examples

if(interactive()){
mart <- useMart("ensembl", dataset="hsapiens_gene_ensembl")

#seq<-getSequence(chromosome=c(2,2),start=c(100000,30000),end=c(100300,30500),mart=mart)
#exportFASTA(seq,file="test.fasta")

martDisconnect(mart = mart)
}