biomartr (version 0.5.1)

listKingdoms: List number of available genomes in each kingdom of life

Description

Users can retrieve the available number of sequenced genomes per kingdom.

Usage

listKingdoms(db = "refseq")

Arguments

db

a character string specifying the database for which genome availability shall be checked, e.g. db = "refseq", db = "genbank", db = "ensembl", db = "ensemblgenomes".

See Also

listGenomes, is.genome.available, listGroups

Examples

## Not run: ------------------------------------
# # list number of available genomes in refseq for each kingdom of life
# listKingdoms(db = "refseq")
# # example for genbank
# listKingdoms(db = "genbank")
# # example for ensembl
# listKingdoms(db = "ensembl")
# # example for ensemblgenomes
# listKingdoms(db = "ensemblgenomes")
## ---------------------------------------------