resplt-deprecated

Produces plots of residuals for assumption checking of linear (mixed) models.

internal

Provides functions to aid in the design and analysis of
agronomic and agricultural experiments through easy access to
documentation and helper functions, especially for users who are
learning these concepts. While not required for most functionality,
this package enhances the `asreml` package which provides a
computationally efficient algorithm for fitting mixed models
using Residual Maximum Likelihood. It is a commercial package
that can be purchased as 'asreml-R' from 'VSNi'
<https://vsni.co.uk/>, who will supply a zip file for local
installation/updating (see <https://asreml.kb.vsni.co.uk/>).

Sam Rogers

biometryassist

Functions to Assist Design and Analysis of Agronomic Experiments

Sharon Nielsen

Annie Conway

University of Adelaide 

Grains Research and Development Corporation 

resplt-deprecated function

<dl><dt>model.obj</dt>
<dd>An <code>aov</code>, <code>lm</code>, <code>lme</code> (<code><a href="/link/nlme%3A%3Alme()?package=biometryassist&version=1.3.0" data-mini-rdoc="biometryassist::nlme::lme()">nlme::lme()</a></code>), <code>lmerMod</code> (<code><a href="/link/lme4%3A%3Almer()?package=biometryassist&version=1.3.0" data-mini-rdoc="biometryassist::lme4::lmer()">lme4::lmer()</a></code>), <code>asreml</code> or <code>mmer</code> (sommer) model object.</dd>
<dt>shapiro</dt>
<dd>(Logical) Display the Shapiro-Wilks test of normality on the plot?</dd>
<dt>call</dt>
<dd>(Logical) Display the model call on the plot?</dd>
<dt>axes.size</dt>
<dd>A numeric value for the size of the axes label font size in points.</dd>
<dt>label.size</dt>
<dd>A numeric value for the size of the label (A,B,C) font point size.</dd>
<dt>call.size</dt>
<dd>A numeric value for the size of the model displayed on the plot.</dd>
<dt>mod.obj</dt>
<dd>Deprecated to be consistent with other functions. Please use <code>model.obj</code> instead.</dd></dl>

Arguments

Residual plots of linear models. — resplt-deprecated

<dl>

<dt>model.obj</dt>
<dd>An <code>aov</code>, <code>lm</code>, <code>lme</code> (<code><a href='https://rdrr.io/pkg/nlme/man/lme.html'>nlme::lme()</a></code>), <code>lmerMod</code> (<code><a href='https://rdrr.io/pkg/lme4/man/lmer.html'>lme4::lmer()</a></code>), <code>asreml</code> or <code>mmer</code> (sommer) model object.</dd>


<dt>shapiro</dt>
<dd>(Logical) Display the Shapiro-Wilks test of normality on the plot?</dd>


<dt>call</dt>
<dd>(Logical) Display the model call on the plot?</dd>


<dt>axes.size</dt>
<dd>A numeric value for the size of the axes label font size in points.</dd>


<dt>label.size</dt>
<dd>A numeric value for the size of the label (A,B,C) font point size.</dd>


<dt>call.size</dt>
<dd>A numeric value for the size of the model displayed on the plot.</dd>


<dt>mod.obj</dt>
<dd>Deprecated to be consistent with other functions. Please use <code>model.obj</code> instead.</dd>

</dl>

resplt-deprecated: Residual plots of linear models.

Description

Usage

Value

Arguments

See Also