vec_ptype2.bioseq_aa

vec_cast.bioseq_aa

vec_ptype2.bioseq_dna

vec_cast.bioseq_dna

vec_ptype2.bioseq_rna

vec_cast.bioseq_rna

Internal
Internal
Internal
Internal
Internal
Internal

internal

Classes and functions to work with biological sequences (DNA, RNA and amino acid sequences).
Implements S3 infrastructure to work with biological sequences as described in Keck (2020) <doi:10.1111/2041-210X.13490>.
Provides a collection of functions to perform biological conversion among classes
(transcription, translation) and basic operations on sequences
(detection, selection and replacement based on positions or patterns).
The package also provides functions to import and export sequences from and to other package formats.

Francois Keck

bioseq

A Toolbox for Manipulating Biological Sequences

vec_ptype2.bioseq_aa function

<dl><dt>x</dt>
<dd>an object.</dd>
<dt>y</dt>
<dd>an object.</dd>
<dt>...</dt>
<dd>other arguments.</dd>
<dt>to</dt>
<dd>a class</dd></dl>

Arguments

Internal — vec_ptype2.bioseq_aa

<dl>

<dt>x</dt>
<dd>an object.</dd>


<dt>y</dt>
<dd>an object.</dd>


<dt>...</dt>
<dd>other arguments.</dd>


<dt>to</dt>
<dd>a class</dd>

</dl>

vec_ptype2.bioseq_aa: Internal

Description

Usage

Arguments