dis_loop

list of presence absence matrices for a set of sites or
cells of a grid.

site_spp_list

number of column where the species list (other columns) starts.

icol

number of column where the species list (other columns) ends.

fcol

(character) dissimilarity index to be passed to function
<code><a rd-options="vegan" href="/link/vegdist?package=biosurvey&version=0.1.1&to=vegan" data-mini-rdoc="vegan::vegdist">vegdist</a></code>. Default = "jaccard". See details.

method

(logical) whether or not to print messages about the process.
Default = TRUE.

verbose

other arguments to be passed to function
<code><a rd-options="vegan" href="/link/vegdist?package=biosurvey&version=0.1.1&to=vegan" data-mini-rdoc="vegan::vegdist">vegdist</a></code>.

Helper to calculate dissimilarities in loop

A collection of tools that allows users to plan systems of sampling
sites, increasing the efficiency of biodiversity monitoring by considering
the relationship between environmental and geographic conditions in a
region. The options for selecting sampling sites included here differ from
other implementations in that they consider the environmental and geographic
conditions of a region to suggest sampling sites that could increase the
efficiency of efforts dedicated to monitoring biodiversity. The methods
proposed here are new in the sense that they combine various criteria and
points previously made in related literature; some of the theoretical and
methodological bases considered are described in:
Arita et al. (2011) <doi:10.1111/j.1466-8238.2011.00662.x>,
Sober<c3><b3>n and Cavner (2015) <doi:10.17161/bi.v10i0.4801>, and Sober<c3><b3>n et al.
(2021).

Claudia Nu<c3><b1>ez-Penichet

biosurvey

Tools for Biological Survey Planning

Marlon E. Cobos

Jorge Sober<c3><b3>n

Tomer Gueta

Narayani Barve

Vijay Barve

Adolfo G. Navarro-Sig<c3><bc>enza

A. Townsend Peterson

dis_loop function

(character) dissimilarity index to be passed to function
<code><a rd-options='vegan' href='vegdist'>vegdist</a></code>. Default = "jaccard". See details.

other arguments to be passed to function
<code><a rd-options='vegan' href='vegdist'>vegdist</a></code>.

dis_loop: Helper to calculate dissimilarities in loop

Description

Usage

Arguments

Value