tempbetagrid

Uses two occurrence matrices (from different time periods) to calculate temporal beta diversity for each site or grid cell.

Contains functions mainly focused to plotting bivariate maps.

Jose Hidasi-Neto

bivariatemaps

Creates Bivariate Maps

tempbetagrid function

<dl><dt>oc1</dt>
<dd>Community data matrix (species occurrence on each grid cell).</dd>
<dt>oc2</dt>
<dd>Second community data matrix (species occurrence on each grid cell) for another time period.</dd>
<dt>index</dt>
<dd>Calculate "sorensen" or "jaccard". Default is "sorensen".</dd>
<dt>phylotree</dt>
<dd>Optional phylogenetic tree ("phylo" class). It can also be a functional dendrogram.</dd>
<dt>phylobeta</dt>
<dd>Optional boolean indicating whether or not to calculate phylogenetic beta diversity (see "phylo.beta.pair" function in "betapart" package) instead of the usual beta diversity (see "beta.pair" function in "betapart" package). Default is F.</dd></dl>

Arguments

tempbetagrid: Calculates Temporal Beta Grid Using Species' Occurrences — tempbetagrid

<dl>

<dt>oc1</dt>
<dd>Community data matrix (species occurrence on each grid cell).</dd>


<dt>oc2</dt>
<dd>Second community data matrix (species occurrence on each grid cell) for another time period.</dd>


<dt>index</dt>
<dd>Calculate "sorensen" or "jaccard". Default is "sorensen".</dd>


<dt>phylotree</dt>
<dd>Optional phylogenetic tree ("phylo" class). It can also be a functional dendrogram.</dd>


<dt>phylobeta</dt>
<dd>Optional boolean indicating whether or not to calculate phylogenetic beta diversity (see "phylo.beta.pair" function in "betapart" package) instead of the usual beta diversity (see "beta.pair" function in "betapart" package). Default is F.</dd>

</dl>

tempbetagrid: tempbetagrid: Calculates Temporal Beta Grid Using Species' Occurrences

Description

Usage

Value

Arguments

Examples