writeFinalInfo

Final code of the R script written by the Migraine software (<a href="https://kimura.univ-montp2.fr/~rousset/Migraine.htm">https://kimura.univ-montp2.fr/~rousset/Migraine.htm</a>; see main documentation page for the package, for the context). This prints some information, close output files, and beeps to warn that a possibly long computation is finished.

Performs prediction of a response function from simulated response values, allowing black-box optimization of functions estimated with some error. Includes a simple user interface for such applications, as well as more specialized functions designed to be called by the Migraine software (Rousset and Leblois, 2012 <doi:10.1093/molbev/MSR262>; Leblois et al., 2014 <doi:10.1093/molbev/msu212>; and see URL). The latter functions are used for prediction of likelihood surfaces and implied likelihood ratio confidence intervals, and for exploration of predictor space of the surface. Prediction of the response is based on ordinary Kriging (with residual error) of the input. Estimation of smoothing parameters is performed by generalized cross-validation.

Franois Rousset

blackbox

Black Box Optimization and Exploration of Parameter Space

François Rousset

Raphaël Leblois

writeFinalInfo function

<dl> <dt>cleanResu</dt>
<dd>A connection, or a character string naming a file for some nicely formated output. If <code>""</code> (the default), print to the standard output connection.</dd></dl>

Arguments

Final code of the R script written by the Migraine software (<a href='https://kimura.univ-montp2.fr/~rousset/Migraine.htm'>https://kimura.univ-montp2.fr/~rousset/Migraine.htm</a>; see main documentation page for the package, for the context). This prints some information, close output files, and beeps to warn that a possibly long computation is finished.

Pretty output, and management of output files — writeFinalInfo

<dl>

 <dt>cleanResu</dt>
<dd>A connection, or a character string naming a file for some nicely formated output. If <code>""</code> (the default), print to the standard output connection.</dd>

</dl>

writeFinalInfo: Pretty output, and management of output files

Description

Usage

Value

Arguments