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blmeco (version 1.0)

Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"

Description

Data files and functions accompanying the book Korner-Nievergelt, Roth, von Felten, Guelat, Almasi, Korner-Nievergelt (2015) "Bayesian Data Analysis in Ecology using R, BUGS and Stan", Elsevier, New York.

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Version

Install

install.packages('blmeco')

Monthly Downloads

538

Version

1.0

License

GPL-2

Maintainer

Fraenzi KornerNievergelt

Last Published

February 4th, 2015

Functions in blmeco (1.0)

Bayesian leave-one-out cross-validation

wildflowerfields

Territory numbers of Whitethroat in wildflowerfields

survival_swallows

Telemetry data of Barn swallow fledglings

Gives the x and y-coordinates of the cross point of two straight lines

Presence-absence data of Little owls in nest boxes

Ordinary cross validation score

The data contain morphological measurements taken from museum skins of Coal tits (Periparus ater)

Simulated set of correlated variables

Data set with number of nesting swallows per barn

Produces QQ-plots of model residuals and of random normal samples

stress hormone data of nestling barn owls which were either treated with a corticosterone-implant or with a placebo-implant as control

Counts of the number of frogs in a water body

Calculates AICc-weights for each model of a set of models

yellow_bellied_toad

Site-occupancy data for Yellow-bellied toads

Number of migrating Great tits

Common Redstart (Phoenicurus phoenicurus) counts

Sperm depletion data in a hermaphrodite sea slug

Data Sets and Functions Accompagning the Book Bayesian Data Analysis in Ecology Using Linear Models with R, BUGS and Stan

Fake Data of the Numbers of Frogs in Ponds

Hohenheim groundwater table experiment of Heinz Ellenberg

Growth rate data of Barn owl nestlings and corticosterone

Number of fledged Barn Swallows per nest

roostingsiteuse

Roosting site use by little owls

Watanabe-Akaike or widely applicable information criterion (WAIC)

Nightingale territory occupancy data

Survival data of tree sprouts

Function to plot history (trace) plots of the Markov chains obtained by STAN or by WinBUGS.

Breeding success of Black storks in Latvia

dispersion_glmer

Measures dispersion in a glmer-model

triplot.normal.knownvariance

Draw prior, data and posterior for a known variance normal distribution example

Fake Data: Number of Frogs in Ponds