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bnpsd (version 1.0.4)

Simulate Genotypes from the BN-PSD Admixture Model

Description

The Pritchard-Stephens-Donnelly (PSD) admixture model has k intermediate subpopulations from which n individuals draw their alleles dictated by their individual-specific admixture proportions. The BN-PSD model additionally imposes the Balding-Nichols (BN) allele frequency model to the intermediate populations, which therefore evolved independently from a common ancestral population T with subpopulation-specific FST (Wright's fixation index) parameters. The BN-PSD model can be used to yield complex population structures. Method described in Ochoa and Storey (2016) .

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install.packages('bnpsd')

Monthly Downloads

285

Version

1.0.4

License

GPL-3

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Maintainer

Alejandro Ochoa

Last Published

February 12th, 2019