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bossR (version 1.0.4)

Biomarker Optimal Segmentation System

Description

The Biomarker Optimal Segmentation System R package, 'bossR', is designed for precision medicine, helping to identify individual traits using biomarkers. It focuses on determining the most effective cutoff value for a continuous biomarker, which is crucial for categorizing patients into two groups with distinctly different clinical outcomes. The package simultaneously finds the optimal cutoff from given candidate values and tests its significance. Simulation studies demonstrate that 'bossR' offers statistical power and false positive control non-inferior to the permutation approach (considered the gold standard in this field), while being hundreds of times faster.

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Version

Install

install.packages('bossR')

Monthly Downloads

155

Version

1.0.4

License

GPL-3

Maintainer

Xuekui Zhang

Last Published

January 15th, 2024

Functions in bossR (1.0.4)

myGene

clinical dataset
getOC

Select Optimal cutoff for a biomarker
getpvalue

Computes the distribution function of the multivariate normal distribution
getbeta

Get regression coefficient