update.bqtl: Get loglikelihoods for many models of a common form
Description
For a single type of model, this function evaluates multiple models that
differ only in terms of the loci involved. The looping is all done by
internal C functions, so this is faster than simply using bqtl to
do the same thing.
Usage
update.bqtl(setup, loc.mat, ana.obj)
Arguments
setup
The object returned by bqtl( <...> , setup=TRUE )
loc.mat
A matrix of locus numbers, s.t. nrow(loc.mat)
equals the number of loci in setup
ana.obj
An analysis.object). Usually the one used in setup)In order to avoid the computational overhead of running large loops of
very repetitive operations in R/S, update.bqtl used after the
setup=TRUE