bqtl (version 1.0-7)

summary.bqtl: Summarize bqtl object

Description

Extract coefficients (and related stats), loglikelihood, and residual standard error of the trait.

Usage

## S3 method for class 'bqtl':
summary(object,\dots)

Arguments

object

The result of link{bqtl}

...

Currently not used

Value

• A list containing
• coefficients
  Either a vector of regression coefficents, or if {object} was created via bqtl(...,return.hess=TRUE), then a matrix with coefficients, standard errors, t-statistics, and p-values
• loglik
  the loglikelihood or log posterior
• std.res
  The residual standard deviation of the trait
• N
  The counts of all observations, the number omitted, and the number used in the fit

Examples

data(little.ana.bc)
fit <- bqtl( bc.phenotype~locus(4)*locus(45), little.ana.bc,
return.hess=TRUE )
summary(fit)
<testonly>rm(little.ana.bc,fit)</testonly>