brainGraph (version 2.2.0)

summary.bg_GLM: Print a summary from brainGraph_GLM analysis

Description

summary prints the results from a brainGraph_GLM analysis. It will only print results for which \(p < \alpha\); you may change this to the FDR-adjusted or permutation p-values via the function argument p.sig.

Usage

# S3 method for bg_GLM
summary(object, p.sig = c("p", "p.fdr", "p.perm"),
  contrast = NULL, digits = max(3L, getOption("digits") - 2L),
  print.head = TRUE, ...)

Arguments

object

A bg_GLM object

p.sig

Character string specifying which p-value to use for displaying significant results (default: p)

contrast

Integer specifying the contrast to summarize; defaults to showing results for all contrasts

digits

Integer specifying the number of digits to display for p-values

print.head

Logical indicating whether or not to print only the first and last 5 rows of the statistics tables (default: TRUE)

...

Unused