bwas

Runs SVEN and UNITE for one trait.

internal

Performs Bayesian variable screening and selection for ultra-high dimensional linear regression models.Also contains an user friendly web application to perform multi trait GWAS.

Dongjin Li

bravo

Bayesian Screening and Variable Selection

Debarshi Chakraborty

Somak Dutta

Vivekananda Roy

bwas function

<dl><dt>x</dt>
<dd>Cleaned SNP matrix.</dd>
<dt>y</dt>
<dd>Phenotype vector.</dd>
<dt>params</dt>
<dd>Named numeric vector with lambda and w.</dd>
<dt>bigx</dt>
<dd>Full SNP matrix.</dd>
<dt>ehits</dt>
<dd>Expected number of hits (default 20).</dd></dl>

Arguments

BWAS: Bayesian GWAS for a Single Trait — bwas

<dl>

<dt>x</dt>
<dd>Cleaned SNP matrix.</dd>


<dt>y</dt>
<dd>Phenotype vector.</dd>


<dt>params</dt>
<dd>Named numeric vector with lambda and w.</dd>


<dt>bigx</dt>
<dd>Full SNP matrix.</dd>


<dt>ehits</dt>
<dd>Expected number of hits (default 20).</dd>

</dl>

bwas: BWAS: Bayesian GWAS for a Single Trait

Description

Usage

Arguments