pipeline_single_trait

Runs the full GWAS pipeline for the i-th trait column.

internal

Performs Bayesian variable screening and selection for ultra-high dimensional linear regression models.Also contains an user friendly web application to perform multi trait GWAS.

Dongjin Li

bravo

Bayesian Screening and Variable Selection

Debarshi Chakraborty

Somak Dutta

Vivekananda Roy

pipeline_single_trait function

<dl><dt>svenetics_trained_object</dt>
<dd>A trained svenetics object from parameter_selection().</dd>
<dt>i</dt>
<dd>Trait index.</dd>
<dt>hitsize</dt>
<dd>One of "small", "medium", "large", or NULL.</dd></dl>

Arguments

Run GWAS for a Single Trait — pipeline_single_trait

<dl>

<dt>svenetics_trained_object</dt>
<dd>A trained svenetics object from parameter_selection().</dd>


<dt>i</dt>
<dd>Trait index.</dd>


<dt>hitsize</dt>
<dd>One of "small", "medium", "large", or NULL.</dd>

</dl>

pipeline_single_trait: Run GWAS for a Single Trait

Description

Usage

Arguments