tune.sven.all

Tunes SVEN parameters for small, medium, and large expected hit sizes.

internal

Performs Bayesian variable screening and selection for ultra-high dimensional linear regression models.Also contains an user friendly web application to perform multi trait GWAS.

Dongjin Li

bravo

Bayesian Screening and Variable Selection

Debarshi Chakraborty

Somak Dutta

Vivekananda Roy

tune.sven.all function

<dl><dt>x</dt>
<dd>Cleaned SNP matrix.</dd>
<dt>R2</dt>
<dd>Heritability (default 0.5).</dd>
<dt>betamax</dt>
<dd>Maximum effect size magnitude (default 1).</dd>
<dt>n.cores</dt>
<dd>Number of cores for parallel computation.</dd></dl>

Arguments

Tune SVEN for All Hit Sizes — tune.sven.all

<dl>

<dt>x</dt>
<dd>Cleaned SNP matrix.</dd>


<dt>R2</dt>
<dd>Heritability (default 0.5).</dd>


<dt>betamax</dt>
<dd>Maximum effect size magnitude (default 1).</dd>


<dt>n.cores</dt>
<dd>Number of cores for parallel computation.</dd>

</dl>

tune.sven.all: Tune SVEN for All Hit Sizes

Description

Usage

Arguments