brnn (version 0.8)

# D: Genomic dominant relationship matrix for the Jersey dataset.

## Description

This matrix was calculated by using the dominance incidence matrix derived from 33,267 Single Nucleotide Polymorphisms (SNPs) information on 297 individually cows,

$$D=\frac{X_d X_d'}{2 \sum_{j=1}^p (p_j^2+q_j^2) p_j q_j},$$

where

• $$X_d$$ is the design matrix for allele substitution effects for dominance.

• $$p_j$$ is the frecuency of the second allele at locus $$j$$ and $$q_j=1-p_j$$.