broom.mixed v0.2.3
0
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Tidying Methods for Mixed Models
Convert fitted objects from various R mixed-model packages
into tidy data frames along the lines of the 'broom' package.
The package provides three
S3 generics for each model: tidy(), which summarizes a model's statistical findings such as
coefficients of a regression; augment(), which adds columns to the original
data such as predictions, residuals and cluster assignments; and glance(), which
provides a one-row summary of model-level statistics.
Functions in broom.mixed
| Name | Description | |
| insert_NAs | insert a row of NAs into a data frame wherever another data frame has NAs | |
| .extractEffects | Internal function to extract the fixed or random effects from an MCMCglmm object | |
| glmmadmb_tidiers | Tidying methods for glmmADMB models | |
| tidy.TMB | Tidying methods for TMB models | |
| unrowname | strip rownames from an object | |
| ranefLevels | Extract the levels of factors used for random effects in MCMCglmm objects | |
| augment.ranef.mer | Augmentation for random effects (for caterpillar plots etc.) | |
| reexports | Objects exported from other packages | |
| brms_tidiers | Tidying methods for a brms model | |
| nlme_tidiers | Tidying methods for mixed effects models | |
| ranef.MCMCglmm | Extract random effects from an MCMCglmm object | |
| rstanarm_tidiers | Tidying methods for an rstanarm model | |
| stdranef | Extract standard deviation of "random" effects from an MCMCglmm object | |
| fixef.MCMCglmm | Extract fixed effects from an MCMCglmm object | |
| compact | Remove NULL items in a vector or list | |
| tidy.MCMCglmm | Tidying methods for MCMC (Stan, JAGS, etc.) fits | |
| glmmTMB_tidiers | Tidying methods for glmmTMB models | |
| gamlss_tidiers | Tidying methods for gamlss objects | |
| lme4_tidiers | Tidying methods for mixed effects models | |
| paramNamesMCMCglmm | Extract the parameter names from an MCMCglmm object | |
| No Results! | ||
Vignettes of broom.mixed
| Name | ||
| broom_mixed_intro.rmd | ||
| No Results! | ||
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Details
| Type | Package |
| URL | http://github.com/bbolker/broom.mixed |
| BugReports | http://github.com/bbolker/broom.mixed/issues |
| License | GPL-3 |
| RoxygenNote | 6.1.0 |
| Encoding | UTF-8 |
| Additional_repositories | http://bbolker.github.io/drat |
| VignetteBuilder | knitr |
| NeedsCompilation | no |
| Packaged | 2018-10-21 18:43:06 UTC; bolker |
| Repository | CRAN |
| Date/Publication | 2018-10-21 21:40:15 UTC |
| suggests | brms , dotwhisker , gamlss , ggplot2 , glmmADMB , knitr , lme4 , lmerTest , Matrix , MCMCglmm , mgcv , pander , rstan , rstanarm , testthat |
| imports | broom , coda , dplyr , glmmTMB , methods , nlme , plyr , purrr , reshape2 , stringr , tibble , tidyr , TMB |
| depends | R (>= 3.5.0) |
| Contributors | David Robinson, Jonah Gabry, Dieter Menne, Patrick Kennedy, Paul Buerkner, Christopher Hua, Will Petry, Josh Wiley |
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