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brt (version 1.3.0)

Biological Relevance Testing

Description

Analyses of large-scale -omics datasets commonly use p-values as the indicators of statistical significance. However, considering p-value alone neglects the importance of effect size (i.e., the mean difference between groups) in determining the biological relevance of a significant difference. Here, we present a novel algorithm for computing a new statistic, the biological relevance testing (BRT) index, in the frequentist hypothesis testing framework to address this problem.

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Version

Install

install.packages('brt')

Monthly Downloads

9

Version

1.3.0

License

GPL (>= 2)

Maintainer

Le Zheng

Last Published

May 1st, 2018

Functions in brt (1.3.0)

brt.test

BRT test
logmeanexp

Mean of Numbers in Log-Scale
tpval

The P-value of a t Test Base on a t-statistic.
tpvalavg

Average of The Student t Distribution
tpvalint

Hypothesis testing using the Student t Distribution with H0: lo <= mu <= hi
logsumexp

Sum of Numbers in Log-Scale
tpvaltreat

Hypothesis testing using the Student t Distribution with H0: abs(mu) <= delta
dtavg

Average of the Student t Distribution