These are the UI and server components of the DE plot panel of the
shiny app. It is generated by including 'DEplot' in the panels.default argument
of generateShinyApp
.
DEplotPanelUI(id, show = TRUE)DEplotPanelServer(id, DEresults, anno)
The UI and Server components of the shiny module, that can be used within the UI and Server definitions of a shiny app.
the input slot that will be used to access the value
whether to show the panel or not; default is TRUE; there for compatibility with specifying panels to show
differential expression results output from DEpanelServer; a reactive list with slots 'DEtable' (all genes), 'DEtableSubset' (only DE genes), 'lfcThreshold' and 'pvalThreshold'
annotation data frame containing a match between the row names
of the expression.matrix (usually ENSEMBL IDs) and the gene names that
should be rendered within the app and in output files; this object is
created by generateShinyApp
using the org.db specified