bulkAnalyseR (version 1.1.0)

find_regulators_with_recurring_edges: Find recurring regulators

Description

This function finds regulators that appear as the same network edge in more than one of the input networks.

Usage

find_regulators_with_recurring_edges(weightMatList, plotConnections)

Value

A vector containing the names of the recurring regulators

Arguments

weightMatList

a list of (weighted) adjacency matrices; each list element must be an adjacency matrix with regulators in rows, targets in columns

plotConnections

the number of connections to subset to

Examples

weightMat1 <- matrix(
  c(0.1, 0.4, 0.8, 0.3), nrow = 2, ncol = 2,
  dimnames = list("regulators" = c("r1", "r2"), "targets" = c("t1", "t2"))
)
weightMat2 <- matrix(
  c(0.1, 0.2, 0.8, 0.3), nrow = 2, ncol = 2,
  dimnames = list("regulators" = c("r1", "r2"), "targets" = c("t1", "t2"))
)
find_regulators_with_recurring_edges(list(weightMat1, weightMat2), 2)