cRegulome (version 0.3.2)

cor_prep: Prepare correlation data for plotting

Description

Not meant to be called directly by the user.

Usage

cor_prep(ob, study, add_dir = TRUE, add_corr = TRUE)

Arguments

ob

A cmicroRNA or cTF object such as this returned by calling cmicroRNA or cTF.

study

A character vector of The Cancer Genome Atlas (TCGA) study identifiers. To view the available studies in TCGA project, https://tcga-data.nci.nih.gov/docs/publications/tcga. When left to default NULL all available studies will be included.

add_dir

A logical default TRUE for whether to add a column called Direction that has the direction of the correlation; positive or negative.

add_corr

A logical default TRUE for whether to add a column called Correlation that has the absolute value of the correlation

Value

A data.frame