caOmicsV-package

caOmicsV

This package provides methods to display genomic data with two layouts: bioMatrix layout: sample info and multiple genomic data are displayed as 
 matrix with rows for features(phenotypes and genes, and columns for each 
 sample. Omics data will be plotted with different layers when necessary. bioNetCircos layout: sample info and multiple genomic data are displayed 
 on an biological network with node for features (e.g., genes) and on each 
 node, sample info and genomic data are plotted with circular layout.

 package

caOmicsV package provides methods to visualize
multi-dimentional cancer genomics data including of patient
information, gene expressions, DNA methylations, DNA copy
number variations, and SNP/mutations in matrix layout or
network layout.

Hongen Zhang

Visualization of multi-dimentional cancer genomics data

caOmicsV-package function

This package provides methods to display genomic data with two layouts:

    bioMatrix layout: sample info and multiple genomic data are displayed as 
    matrix with rows for features(phenotypes and genes, and columns for each 
    sample. Omics data will be plotted with different layers when necessary. 

    bioNetCircos layout: sample info and multiple genomic data are displayed 
    on an biological network with node for features (e.g., genes) and on each 
    node, sample info and genomic data are plotted with circular layout.

caOmicsV-package: caOmicsV bioMatrix and bioNetCircos Layout Plot

Description

Arguments