caOmicsV (version 1.2.0)

plotBioMatrixBars: Bar Plot on caOmicsV bioMatrix Layout

Description

Bar plot method for caOmicsV bioMatrix layout with non-negative numeric matrix or vector with values in range of 0 ~ 1. bioMatrix layout and graphic device must be initialized first.

Usage

plotBioMatrixBars(barData, barColor="red", areaName="omicsData",  byRow=TRUE, skipPlotRow=0, skipPlotColumns=0)

Arguments

barData

non-negative numeric matrix or vector with values in range of 0 ~ 1

barColor

character vector for color name or R color specification

areaName

character vector, name of plot area, currentlt use "omicsData" only

byRow

logic, whether plot bars for each row or not

skipPlotRow

non-negative integer, how many row(s) to be skipped from first row

skipPlotColumns

non-negative integer, how many row(s) to be skipped from first column

Value

None

Examples

    initializeBioMatrixPlot(numOfGenes=1, numOfSamples=50)
    showBioMatrixPlotLayout("Gene", paste("Sample", 1:50),  "Diagnosis")

    barData <- matrix(c(rep(0.25, 15), rep(0.75, 20), rep(0.5, 15)), nrow=1)
    plotBioMatrixBars(barData, barColor="red")