setBioMatrixBaseCoordinates


    non-negative integer, number of samples to be plotted
    

numOfSamples


    non-negative numeric, width of rectangle in inch for each sample, 
    default 0.1
    

sampleWidth


    non-negative numeric, padding width in inch between two samples, 
    default 0.025
    

columnPadding


    non-negative numeric, height of rectangle in inchfor each sample, 
    default 0.4
    

sampleHeight


    non-negative numeric, width of gene labeling area in inch, default 1
    

geneNameWidth


    Initialize x and y coordinates for each plot area on bioMatrix layout. 
    This function is for internal use only.


 methods 

caOmicsV package provides methods to visualize
multi-dimentional cancer genomics data including of patient
information, gene expressions, DNA methylations, DNA copy
number variations, and SNP/mutations in matrix layout or
network layout.

Hongen Zhang

caOmicsV

Visualization of multi-dimentional cancer genomics data

setBioMatrixBaseCoordinates function

non-negative integer, number of samples to be plotted

non-negative numeric, width of rectangle in inch for each sample, 
    default 0.1

non-negative numeric, padding width in inch between two samples, 
    default 0.025

non-negative numeric, height of rectangle in inchfor each sample, 
    default 0.4

non-negative numeric, width of gene labeling area in inch, default 1

Initialize x and y coordinates for each plot area on bioMatrix layout. 
    This function is for internal use only.

setBioMatrixBaseCoordinates: Set up Base Coordinates for caOmicsV bioMatrix Layout

Description

Usage

Arguments

Value

Examples