setBioMatrixPlotParameters: Set up Plot Parameters for caOmicsV bioMatrix Layout

Description

Put biomatrix plot parameters to CA_OMICS_ENV environment. All arguments should be validated outside in advance. This function is for internal use only.

Usage

setBioMatrixPlotParameters(numOfGenes, numOfSamples, numOfPhenotypes,  sampleHeight, sampleWidth, columnPadding, rowPadding,  geneNameWidth, remarkWidth, summaryWidth, sampleNameHeight,  legendHeight)

Arguments

numOfGenes

non-negative integer, total number of genes to be plotted

numOfSamples

non-negative integer, total number of samples to be plotted

numOfPhenotypes

non-negative integer, total number of phenotypes to be plotted

sampleHeight

non-negative numeric, height of polygon (sample) in inch on each row

sampleWidth

non-negative numeric, width of polygon (sample) in inch on each row

columnPadding

non-negative numeric, padding width in inch between two polygons (samples)

rowPadding

non-negative numeric, padding height in inch between two rows

geneNameWidth

non-negative numeric, width of left text plot area in inch for gene names

remarkWidth

non-negative numeric, width of plot area in inch for right side text plot (second set of gene names) and/or summary data plot

summaryWidth

non-negative numeric, width of plot area in inch on right side of data plot area for summary info plot

sampleNameHeight

non-negative numeric, height of plot area in inch for sample names

legendHeight

non-negative numeric, height of legend area

Value

None

Examples

Run this code

    #  Internal use only

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