caOmicsV (version 1.2.0)

showBioNetNodesLayout: Display Nodes Layout of caOmicsV bioNetCircos Plot

Description

Display bioNetCircos layout with empty nodes and edges in order to optimize bioNetCircos layout. An igraph object must be initialized first.

Usage

showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))

Arguments

bgColor

character vector for a color name or a R color specification

Value

None

Examples

    data(bionetPlotDemoData)
    expr <- bionetPlotDemoData$heatmapData[[1]]
    bioNet <- bc3net(expr)

    initializeBioNetCircos(bioNet, totalSamples=60)
    showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))