make_vpc_summary

Make the VPC summary. Input data frame must contain the following columns:
- replicate: replicate number
- low: low percentile value in replicate (and in scenario if present)
- med: median value in replicate (and in scenario if present)
- up: up percentile value in replicate (and in scenario if present)
- any scenario column

internal

A generic, easy-to-use and intuitive
pharmacokinetic/pharmacodynamic (PK/PD) simulation platform based on
the R packages 'rxode2' and 'mrgsolve'. Campsis provides an
abstraction layer over the underlying processes of defining a PK/PD
model, assembling a custom dataset and running a simulation. The
package has a strong dependency on the R package 'campsismod', which
allows models to be read from and written to files, including through
a JSON-based interface, and to be adapted further on the fly in the R
environment. In addition, 'campsis' allows users to assemble datasets
in an intuitive manner, including via a JSON-based interface to import
Campsis datasets defined using formal JSON schemas distributed with
the package. Once the dataset is ready, the package prepares the
simulation, calls 'rxode2' or 'mrgsolve' (at the user's choice), and
returns the results for the given model, dataset and desired
simulation settings. The package itself is licensed under the GPL (>=
3); the JSON schema files shipped in inst/extdata are licensed
separately under the Creative Commons Attribution 4.0 International
(CC BY 4.0).

Nicolas Luyckx

campsis

Generic PK/PD Simulation Platform Campsis

make_vpc_summary function

<dl><dt>x</dt>
<dd>data frame, with metric</dd>
<dt>strata</dt>
<dd>named vector with the strata to use, default is c(SCENARIO="all", ARM="all").
Only columns that are actually present in <code>x</code> are used.</dd>
<dt>level</dt>
<dd>PI level, default is 0.9 (90% PI)</dd></dl>

Arguments

Make the VPC summary. Input data frame must contain the following columns:
- replicate: replicate number
- low: low percentile value in replicate (and in scenario if present)
- med: median value in replicate (and in scenario if present)
- up: up percentile value in replicate (and in scenario if present)
- any scenario column — make_vpc_summary

<dl>

<dt>x</dt>
<dd>data frame, with metric</dd>


<dt>strata</dt>
<dd>named vector with the strata to use, default is c(SCENARIO="all", ARM="all").
Only columns that are actually present in <code>x</code> are used.</dd>


<dt>level</dt>
<dd>PI level, default is 0.9 (90% PI)</dd>

</dl>

Make the VPC summary. Input data frame must contain the following columns:
- replicate: replicate number
- low: low percentile value in replicate (and in scenario if present)
- med: median value in replicate (and in scenario if present)
- up: up percentile value in replicate (and in scenario if present)
- any scenario column

Description

Usage

Value

Arguments