fdr<-

 Can be <code>ccGeneList</code>, <code>HyperGParamsCC</code>, <code>HyperGResultCC</code>, <code>ccEnrichResult</code> See Details for more information.

object


Queries or sets the number of random runs to perform to generate an estimate of the false discovery rate. Defaults to 50


Calculates significant annotations (categories) in each of
two (or more) feature (i.e. gene) lists, determines the overlap
between the annotations, and returns graphical and tabular data
about the significant annotations and which combinations of
feature lists the annotations were found to be significant.
Interactive exploration is facilitated through the use of
RCytoscape (heavily suggested).

Robert M Flight

categoryCompare

Meta-analysis of high-throughput experiments using feature
annotations

fdr function

Can be <code>ccGeneList</code>, <code>HyperGParamsCC</code>, <code>HyperGResultCC</code>, <code>ccEnrichResult</code> See Details for more information.

Queries or sets the number of random runs to perform to generate an estimate of the false discovery rate. Defaults to 50

fdr: Number of FDR runs to perform

Description

Usage

Arguments

Details

See Also