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categoryCompare (version 1.16.2)

getGeneSymbol: Entrez to name, symbol, GO and path conversion, as well as general ID to ID conversion.

Description

Get different attributes for the Entrez gene Ids

Usage

getGeneSymbol(id, annPackage)
getGeneName(id, annPackage)
getGO2ALLEGS(id, annPackage)
getPATH2EG(id, annPackage)
getAnnotation(id, annPackage, mapID, doUnlist=TRUE)

Arguments

id
The IDs one wants to get information for.
annPackage
Which annotation package to use.
mapID
Which mapping to use
doUnlist
should the results be unlisted or not?

Value

Returns the requested information.

Details

The type of ID will change depending on the function. For getGene... the ID should be Entrez IDs. For getGO2ALLEGS Gene Ontology IDs should be used, and for getPATH2EG KEGG pathways IDs should be used. For getAnnotation, any ID can be used.